New preprint from our lab. We report that genomic islands containing Gamma-Mobile-Trio proteins are bacterial armories stockpiled with antibacterial, anti-phage, and anti-eukaryotic weapons.
This one has something for everybody: #antiphage #T6SS #Vibrio #MGE
https://www.biorxiv.org/content/10.1101/2023.03.28.534373v2
How do interactions between mobile genetic elements affect horizontal gene transfer? - #hgt #mge
https://www.sciencedirect.com/science/article/pii/S136952742300019X
Identifying and tracking mobile elements in evolving compost communities yields insights into the #nanobiome | bioRxiv
#microbiome #evolution #MGE #nanobiome
The #ESKAPE #mobilome contributes to the spread of #antimicrobial resistance and CRISPR-mediated conflict between mobile genetic elements | bioRxiv
#AMR #MGE #crispr #antimicrobial #mobilome #eskape
Mobile genetic elements from the maternal #microbiome shape infant #gut microbial assembly and metabolism: Cell
#mge #microbiota
https://www.cell.com/cell/fulltext/S0092-8674(22)01467-2
#microbiota #MGE #gut #microbiome
Defense systems are pervasive across chromosomally integrated mobile genetic elements and are inversely correlated to virulence and antimicrobial resistance | bioRxiv
Hi :mastodon: !
I'm Jean Cury, post-doc at mdmlab with @audeber, working on evolution of bacterial defense systems.
I also develop #deeplearning method for bacterial #popgen.
Other topics of interest include #integrons, #MGE and #evolution of #bacteria in general.
I'm also part of a French NGO working on food system vulnerabilities and resilience. I set up their mastodon account a few years back. You can follow them here : @lga (in French)
#evolution #bacteria #introduction #deeplearning #popgen #integrons #MGE
Hi :mastodon: !
I'm Jean Cury, doing #bioinformatics at mdmlab with @audeber, working on evolution of bacterial defense systems.
I also develop #deeplearning method for bacterial #popgen.
Other topics of interest include #integrons, #MGE and #evolution of #bacteria in general.
I'm also part of the French NGO "LGA", working on food system vulnerabilities and resilience. I set up their mastodon account a few years back. You can follow them here : @lga (in French)
#bioinformatics #deeplearning #popgen #integrons #MGE #evolution #bacteria #introduction
Tootagging away:
#bacteria #genomics #evolution #microbiology #microbes #antibiotics #microbialgenomics #transcription #regulation #promoter #TFbinding #motif #MGE #SOSresponse #stress #PSSM #collecTF #ontology #corpora #evolutionarybiology
#bacteria #genomics #evolution #microbiology #microbes #antibiotics #MicrobialGenomics #transcription #regulation #promoter #TFbinding #motif #MGE #SOSresponse #stress #PSSM #collecTF #ontology #corpora #EvolutionaryBiology
Tootagging away:
#bacteria #genomics #evolution #microbiology #microbes #antibiotics #microbialgenomics #transcription #regulation #promoter #TFbinding #motif #MGE #SOSresponse #stress #PSSM #collecTF #ontology #corpora #evolutionarybiology
#bacteria #genomics #evolution #microbiology #microbes #antibiotics #MicrobialGenomics #transcription #regulation #promoter #TFbinding #motif #MGE #SOSresponse #stress #PSSM #collecTF #ontology #corpora #EvolutionaryBiology
#introductions #twittermigration
I'm a microbiologist #Science, originally from a wonderful place in the north of Spain 🇪🇸, #Asturias, but installed in Paris 🇫🇷 .
Interested in microbial #evolution and #ecology and how extracellular surface structures, like the capsule, shape the interactions with the environment, other bacteria & #MGE to drive #adaptation.
Special focus on #Klebsiella and the spread of #AMR.
Already loving (& making the most) of the 500 characters! 😍
#introductions #twittermigration #Science #Asturias #evolution #ecology #MGE #adaptation #Klebsiella #AMR