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GitHub - GitHub - RickGelhausen/HRIBO: We present HRIBO (High-throughput annotation by Ribo-seq), a workflow to enable reproducible and high-throughput analysis of bacterial Ribo-seq data. The workflow performs all required pre-processing steps and quality control. Importantly, HRIBO outputs annotation-independent ORF predictions based on two complementary prokaryotic-focused tools, and integrates them with additional computed features. This facilitates both the rapid discovery of ORFs and their prioritization for functional characterization.

Referenced link: github.com/RickGelhausen/HRIBO
Originally posted by backofenlab / @BackofenLab@twitter.com: twitter.com/eggtron/status/134

RT by @BackofenLab: Our workflow for analysis of and experiments was published in OUP
doi.org/10.1093/bioinformatics
github.com/RickGelhausen/HRIBO
Awesome collaboration with @realgelhausr @SarahLSvensson @SharmaLab1 @BackofenLab @Florian_Heyl

#reproducible #prokaryotic #RiboSeq #RNAseq #bioinformatics #SPP2002

Last updated 2 years ago
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