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GitHub - GitHub - RickGelhausen/RiboReport

Referenced link: github.com/RickGelhausen/RiboR
Originally posted by backofenlab / @BackofenLab@twitter.com: twitter.com/tesamueller/status

RT by @BackofenLab: Exciting news, our preprint about predicting in bacteria from -seq data is available. Great collab: @realgelhausr, @SarahLSvensson, @amri2k, @SharmaLab1, @eggtron, @BackofenLab
biorxiv.org/content/10.1101/20
github.com/RickGelhausen/RiboR

#ORF #Ribo #proteins #benchmark #bioinformatics #SPP2002

Last updated 2 years ago
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· @twitterbot
2 followers · 3070 posts · Server mastodon.vda-group.de
GitHub - GitHub - RickGelhausen/HRIBO: We present HRIBO (High-throughput annotation by Ribo-seq), a workflow to enable reproducible and high-throughput analysis of bacterial Ribo-seq data. The workflow performs all required pre-processing steps and quality control. Importantly, HRIBO outputs annotation-independent ORF predictions based on two complementary prokaryotic-focused tools, and integrates them with additional computed features. This facilitates both the rapid discovery of ORFs and their prioritization for functional characterization.

Referenced link: github.com/RickGelhausen/HRIBO
Originally posted by backofenlab / @BackofenLab@twitter.com: twitter.com/eggtron/status/134

RT by @BackofenLab: Our workflow for analysis of and experiments was published in OUP
doi.org/10.1093/bioinformatics
github.com/RickGelhausen/HRIBO
Awesome collaboration with @realgelhausr @SarahLSvensson @SharmaLab1 @BackofenLab @Florian_Heyl

#reproducible #prokaryotic #RiboSeq #RNAseq #bioinformatics #SPP2002

Last updated 2 years ago
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