Brian Kleiboeker · @briankleib
13 followers · 13 posts · Server fediscience.org
Recently found a pretty useful tool called pysradb (https://github.com/saketkc/pysradb, PMID: 31114675) for converting between SRR, SRX, and GSM IDs. This has massively improved my workflow for downloading fastq files from the SRA or ENA
#Unix #Bioinformatics #SRA #RNAseq #Kallisto #SRAtoolkit #NGS
#ngs #SRAtoolkit #Kallisto #rnaseq #SRA #bioinformatics #unix
Last updated 3 years ago