Cell/nuclei segmentation by training deep learning models for #CellPose and #StarDist incrementally, using sparse annotations
Latest work by Ko Sugawara, initiated in our team and completed at RIKEN
https://www.biorxiv.org/content/10.1101/2023.06.13.544786v1.full.pdf
If you're interested in the details of our #StarDist-based submission to the 2022 CoNIC challenge, we finally released the code.
https://github.com/stardist/stardist/tree/conic-2022/examples/conic-2022
See this tweet for context: https://twitter.com/martweig/status/1508815288892104714
Have you discovered the image processing forum yet? https://forum.image.sc
Featuring tutorials, requests for guidance, help, discussion of new features and documentation for open source software #FijiSc #ImageJ #CellProfiler #DeepLabCut #Icy #ilastik #napari #QuPath #scikitimage #StarDist and many more.
#groovy #kotlin #python #java #StarDist #scikitimage #QuPath #napari #ilastik #icy #DeepLabCut #CellProfiler #imagej #FijiSc
Have you discovered the image processing forum yet? https://forum.image.sc
Featuring tutorials, requests for guidance, help, discussion of new features and documentation for open source software #FijiSc #ImageJ #CellProfiler #DeepLabCut #Icy #ilastik #napari #QuPath #scikitimage #StarDist and many more.
#java #python #kotlin #groovy
#ilastik #StarDist #FijiSc #imagej #napari #QuPath #scikitimage #java #python #kotlin #groovy #CellProfiler #DeepLabCut #icy