Apple pie · @applepie
37 followers · 112 posts · Server qoto.org
You can quantify #transposon expression in your short-read library in #locus level more accurately with LocusMasterTE and long-read count matrix from the same tissue :D
Integrating long-read RNA sequencing improves locus-specific quantification of transposable element expression
https://www.biorxiv.org/content/10.1101/2023.03.21.533716v1
#TransposableElement #transcriptomics #RNAseq #RNA #ShortRead #LongRead #illumina #nanopore
#rnaseq #rna #Transposon #locus #TransposableElement #transcriptomics #shortread #longread #illumina #nanopore
Matej Lexa · @matej_lexa
190 followers · 178 posts · Server scicomm.xyzMice with overactive LINE-1 #retrotransposons in their brains exhibit movement difficulties, suggesting the genetic elements may play a role in #ataxia in humans. #transposons #TransposableElement #biology #medicine
https://www.the-scientist.com/news-opinion/jumping-genes-can-cause-movement-disorder-study-70485
#medicine #biology #TransposableElement #transposons #ataxia #retrotransposons
Francois Sabot · @francois_sabot
302 followers · 679 posts · Server genomic.social
RT @ChambeyronS
Save the Date ! Minisymposium at @genopolys, @IGH_MTP March 9th.
#TransposableElement #SmallRNA.
#TransposableElement #smallrna
Matej Lexa · @matej_lexa
105 followers · 259 posts · Server scicomm.xyzI never actually posted an #introduction toot, so here it is:
Doing #bioinformatics at Masaryk University #Brno, tooting about #science and life in general. PhD in #PlantBiology from UIUC. Interested in #G-quadruplexes, repetitive sequences (aka #transposons or #repeats) and #genome evolution.
#plants #repeat #dna #protein #PlantBiology #transposon #TransposableElement #Gquadruplex #rstats #linux
#linux #rstats #Gquadruplex #TransposableElement #Transposon #protein #dna #repeat #plants #genome #repeats #transposons #g #plantbiology #science #brno #bioinformatics #introduction