Gene überwinden Artschranke zwischen Mehrzellern. Beleg für horizontalen Gentransfer zwischen Tieren durch eine spezielle Art der Transposons. #Gene #Artschranke #Transposon #Genom #Genetik
https://www.scinexx.de/news/biowissen/gene-ueberwinden-artschranke-zwischen-mehrzellern/

RT @pascale_lesage
We are looking for a new postdoc to join our team @irsl in the center of Paris. Interested in transposable elements, genome organization
and genome instability? Apply!
Know someone who would be interested RT!
#postdocposition #transposon #yeast #genome

You can quantify #transposon expression in your short-read library in #locus level more accurately with LocusMasterTE and long-read count matrix from the same tissue :D

Integrating long-read RNA sequencing improves locus-specific quantification of transposable element expression
https://www.biorxiv.org/content/10.1101/2023.03.21.533716v1

#TransposableElement #transcriptomics #RNAseq #RNA #ShortRead #LongRead #illumina #nanopore

A modular #transposon-based platform for dynamically rewiring gene regulatory networks in bacteria ➡️ https://www.embopress.org/doi/full/10.15252/msb.202211398
from J Collins, Broad Institute, MIT
#functionalgenomics #SynBio #SyntheticBiology #SystemsBiology #GeneRegulatoryNetwork

RT @hub_te
#TEhub update, tomorrow: Wednesday the 8th at 9a PST // 12p EST // 6p CEST

You can find the Zoom link in the #te-hub channel on TransposonsWorldwide Slack.

Join us to discuss developments of #transposon resources for TE Hub #transposon

🌿👾 #plant #transposon friends: I'm looking for a good dataset to benchmark a program detecting insertion polymorphisms. Ideally the samples would have different type of raw sequencing (long+short reads), and a trusted list of known insertion polymorphisms. Open to collab! 🤝

RT @hub_te
DATE CHANGE!!! Next #TEhub update: Wednesday February the 8th (9AM PST // 12AM EST // 6PM CEST)

You can find the Zoom link in the #te-hub channel on TransposonsWorldwide Slack.

Join us to discuss developments of #transposon resources for TE Hub #transposon

RT @clementgoubert
🇧🇷 #Transposon people! Reach out to @rita_rebollo :) #TEhub https://twitter.com/rita_rebollo/status/1621602934583705602

🇧🇷 #Transposon people! Reach out to @rita_rebollo :) #TEhub
---
RT @rita_rebollo
Viva Brasil! 5 week stay, lots of lab visits, and a nice collab with Claudia Carareto (of course)! Thanks CAPES! #transposon people from #Brazil, let's hook up! @hub_te thinking of you! #WorkTripWithKids #WishmeLuck #BrazilianGramaToTheRescue
https://twitter.com/rita_rebollo/status/1621602934583705602

RT @hub_te
Next #TEhub update: Tuesday February the 7th (9AM PST // 12AM EST // 6PM CEST)

You can find the Zoom link in the #te-hub channel on TransposonsWorldwide Slack.

Join us to discuss developments of #transposon resources for TE Hub (http://tehub.org) #transposon

Interesting paper on recombination after DSB in #transposon Ty1 in yeast. https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1010590

#Genome-wide analysis of heat stress-stimulated #transposon mobility in the human #fungal pathogen #Cryptococcus deneoformans | PNAS

https://www.pnas.org/doi/10.1073/pnas.2209831120

#Transposon mutagenesis libraries reveal novel molecular requirements during #CRISPR RNA-guided DNA integration | bioRxiv

https://www.biorxiv.org/content/10.1101/2023.01.19.524723v1

RT @hub_te
The next #TEhub update: Tuesday January 31st (8AM PST // 11AM EST // 5PM CEST)

You can find the Zoom link in the #te-hub channel on TransposonsWorldwide Slack.

Join us to discuss developments of #transposon resources for TE Hub (http://tehub.org) #transposon

RT @hub_te
The next #TEhub update: Tuesday January 31st (8AM PST // 11AM EST // 5PM CEST)

You can find the Zoom link in the #te-hub channel on TransposonsWorldwide Slack.

Join us to discuss developments of #transposon resources for TE Hub (http://tehub.org) #transposon

Revealing Causes for False-Positive and False-Negative Calling of Gene #Essentiality in Escherichia coli Using #Transposon Insertion Sequencing

#tnseq #functionalgenomics

https://journals.asm.org/doi/10.1128/msystems.00896-22

A plant 🌱 #transposon in the human genome? https://link.springer.com/article/10.1007/s12041-022-01398-3

Finally my #introduction. I am #bioinformatician aspiring to do more #datascience, having my first experience in a Biotech startup.

I like to code, self-taught, ahd work mostly with #RStats, but have dabbled in #python and love the #linux command-line.

My background is in experimental (neuro)biology with a transition to #genomics and #transposon / small RNA biology later on. My CV is best captured in this plot done 100% with code.

http://adomingues.github.io/2020/11/25/visual-cv/

Can anyone point to a good recent review on #transposon activity in brains?

Construction of high-density #transposon mutant library of Staphylococcus aureus using #bacteriophage ϕ11 -
#tnseq

https://pubmed.ncbi.nlm.nih.gov/36422842/