Egon Willighagen · @egonw
187 followers · 153 posts · Server social.edu.nl

I mean, I even here now "we like to use version control because..."

It is so cool that things that people from the @blueobelisk movement have been developing, promoting, are pretty normal at an ACS meeting now!

#acsfall2023

Last updated 1 year ago

Matteo Manica · @drugilsberg
77 followers · 4 posts · Server masto.ai

was a blast, and it has been great to show how multimodal
foundation models and hybrid cloud computing will support scientists in the lab of the future.

We ran 47 experiments with our fantastic visitors, resulting in 1512 model predictions and 2 retraining rounds.
A lot of thrashed cold brew coffee, but it was definitely worth it.

Kudos to the whole @ibmresearch team.

Stay tuned for exciting developments, and check out the Lab that Learns project: lnkd.in/enCNMYKW.

#acsfall2023

Last updated 1 year ago

Egon Willighagen · @egonw
187 followers · 153 posts · Server social.edu.nl

I have no idea if any of the speakers is here on yet, but thank you, thank you! I enjoyed all the presentations I watched. And the amount of was mind blowing! preprints, CC-BY work, GitHub repositories, it was all there. Well done, !

#mastodon #openscience #chemistry #acsfall2023

Last updated 1 year ago

Egon Willighagen · @egonw
187 followers · 145 posts · Server social.edu.nl

but I have to say, it has been a awesome again. But this years has been double awesome, my first American Cheminformatics Society meeting!

#acsfall2023

Last updated 1 year ago

Egon Willighagen · @egonw
187 followers · 144 posts · Server social.edu.nl

I am also a bit sad that the presentations (and I'm sure I was just like that myself) do not really indicate what they do better than people before. There is a high level of "we did it this way". Sure, but I want to hear in your talk why this is better, instead of hoping the articles tell me that.

#acsfall2023

Last updated 1 year ago

Egon Willighagen · @egonw
187 followers · 139 posts · Server social.edu.nl

both sessions are basically classical cheminformatics but with a lot more data. and what we saw for chemometrics too, we see that people have started thinking about ensembles and not molecules anymore. not at the model level. and like in chemometrics and in biology, we apply a difficult to grasp model to individual entities and see if it makes sense. N=1,2,3 evaluation of a N^x complex space. Latent spaces won't help.

#chemistry #acsfall2023

Last updated 1 year ago

Egon Willighagen · @egonw
187 followers · 138 posts · Server social.edu.nl

last day. Going to try to follow to related sessions again, "AI in organic chemistry" (where more and more open data is becoming available) and "deep learning / chemical space", but that one seems stalled right now?

#acsfall2023

Last updated 1 year ago

Egon Willighagen · @egonw
184 followers · 131 posts · Server social.edu.nl

Session 2 of the first disclosures: KIN-3248

Wikidata: wikidata.org/wiki/Q121502356

PubChem CID: pubchem.ncbi.nlm.nih.gov/compo

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Last updated 1 year ago

Egon Willighagen · @egonw
184 followers · 129 posts · Server social.edu.nl

I think I got the stereo right. SMILES: CN1C=NC2=C1C(=O)N(C(C)=N2)CC1=NC(=NO1)[C@H]1C[C@@H](OC1)c1ccc(Cl)cc1

#acsfall2023

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Egon Willighagen · @egonw
184 followers · 128 posts · Server social.edu.nl

Now GDC-6599

#acsfall2023

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Egon Willighagen · @egonw
184 followers · 127 posts · Server social.edu.nl
Egon Willighagen · @egonw
184 followers · 127 posts · Server social.edu.nl

CHK-336 SMILES: NS(=O)(=O)c1ccc(cc1F)CC1=C(CC2CC2)N(N=C1c1ccc(F)cc1)C1=NC(=CS1)C(=O)O

#acsfall2023

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Egon Willighagen · @egonw
184 followers · 127 posts · Server social.edu.nl

Next, CHK-336

#acsfall2023

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Egon Willighagen · @egonw
184 followers · 118 posts · Server social.edu.nl

SMILES: Fc1cc(F)c(c2c1)OC(=C(C)2)[C@H](C(F)(F)F)NC(=O)NC1C=NC(=NC=1)N

#acsfall2023

Last updated 1 year ago

Egon Willighagen · @egonw
184 followers · 112 posts · Server social.edu.nl

first talk is about TNG462, and so far we've seen data for and structure of TNG908

(in the other window I'm following the session on metabolites related to age... funnily, they're also talking about SAM-related biology :)

#acsfall2023

Last updated 1 year ago

Egon Willighagen · @egonw
183 followers · 109 posts · Server social.edu.nl

today the first session on "first disclosures" takes please. I have previously blogged about such sessions: chem-bla-ics.blogspot.com/2017

Victoria Yan has done amazing sherlocking to predict which compounds will be disclosed, and likely already confirmed one of the four today (STC-15, KIN-3248, KT-474, RPT193): twitter.com/victoriacyanide/st If you like here work, subscribe to t.co/kwyDqG3bi4

During the session, I will try to get them into Wikidata as soon as possible, like in past

#acsfall2023

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Preston MacDougall · @ChemicalEyeGuy
384 followers · 11179 posts · Server mstdn.science

The American Chemical Society’s Committee on Public Relations and Communications was proud to present the 2023 Helen M. Free Award to University of Professor Dwayne Miller, founder of 👉 sciencerendezvous.ca.

Photo with the CPRC Chair (big 🍷) at the Celebration at the meeting in .

#Toronto #sciencerendezvous #chemluminary #acsfall2023 #sanfrancisco

Last updated 1 year ago

Egon Willighagen · @egonw
183 followers · 106 posts · Server social.edu.nl

I joined the session "New Advances in the Therapeutic Applications of Glycans' and the first talk was about how to use chemistry to improve the therapeutic properties of CART cells, and now learning from Dr. Lara K. Mahal about lectins. This paper was mentioned: pubs.acs.org/doi/full/10.1021/ as well as doi.org/10.1016/j.ccell.2017.0

#acsfall2023

Last updated 1 year ago

Egon Willighagen · @egonw
183 followers · 105 posts · Server social.edu.nl

the next talk is by a developer of the Tangelo open source (Apache 2.0) quantum chemistry package, see arxiv.org/abs/2206.12424

I hope they submitted to J.Cheminform.

(so much this year!!!)

#acsfall2023 #openscience #chemistry

Last updated 1 year ago

Egon Willighagen · @egonw
183 followers · 105 posts · Server social.edu.nl

In the last bits of the morning session, I jumped to the quantum computing session. Listening to a talk from the Intel team, and reading up on HamLib right now arxiv.org/abs/2306.13126

#acsfall2023

Last updated 1 year ago