Marc Robinson-Rechavi · @marcrr
1029 followers · 2016 posts · Server ecoevo.social

Best part of : the bioinformatics awards, highlighting PhD paper, Early career, and Innovative resource sib.swiss/bioinformatics-award

#bc2basel #SIB #bioinformatics #computationalbiology

Last updated 1 year ago

Miguel F. Romero · @miferg
104 followers · 145 posts · Server genomic.social

One high quality genome and twotranscriptome datasets for newspecies of Mantamonas, a deep-branching eukaryote clade
doi.org/10.1038/s41597-023-024

#microbiology #bioinformatics

Last updated 1 year ago

NMR Online + NMRD · @nmronline
195 followers · 211 posts · Server mstdn.science
Arli A P · @arli
97 followers · 162 posts · Server sciencemastodon.com

Studium General -Pascasarjana Universitas Amikom. Saya membahas "Biopython for Structural Bioinformatics " youtube.com/live/-Cn2dk7G3uU?s @indonesia

#bioinformatics #biopython #python #indonesia

Last updated 1 year ago

NMR Online + NMRD · @nmronline
195 followers · 211 posts · Server mstdn.science
Miguel F. Romero · @miferg
104 followers · 144 posts · Server genomic.social

Protein remote homology detection and structural alignment using deep learning
doi.org/10.1038/s41587-023-019

#microbiology #bioinformatics

Last updated 1 year ago

Miguel F. Romero · @miferg
104 followers · 143 posts · Server genomic.social

Galba: genome annotation with miniprot and AUGUSTUS
doi.org/10.1186/s12859-023-054

#microbiology #bioinformatics

Last updated 1 year ago

jobRxiv · @jobRxiv
1023 followers · 3974 posts · Server mas.to
Ferran Cardoso · @ferranc96
20 followers · 95 posts · Server fosstodon.org

🎉 Exciting News!
This week has been a whirlwind of milestones and achievements that I'm thrilled to share with all of you!đź’›(1/5)

#academicchatter #cancerresearch #thesis #genomics #singlecell #bioinformatics

Last updated 1 year ago

Marc Robinson-Rechavi · @marcrr
1014 followers · 1969 posts · Server ecoevo.social
NMR Online + NMRD · @nmronline
194 followers · 209 posts · Server mstdn.science

We're always listening to the community.

You've told us your present experiences, and what you want from software.

– ELECTRO will be fully tested prior to release, and will be intuitive and streamlined, so you can focus on the science!

@bioinformatics @biophysics @chemistry @compchem @nmrchat @physics @strucbio

#NMR #nmronline #biochemistry #bioinformatics #biology #biophysics #chemistry #compchem #metabolomics #physics #softwaredevelopment #softwareengineering #structuralbiology #webdev

Last updated 1 year ago

Adam Monago · @adammonago
3 followers · 19 posts · Server me.dm
Eric Ireland · @erici
725 followers · 34 posts · Server social.sdf.org

Coming out of my self-imposed social media exile to say that “Bioinformatics chat” is a good podcast about

The host, Roman Cheplyaka, is Ukrainian and there was a long time when he didn’t make any new episodes because of the war. He is doing new episodes now and he has a Patreon account.
bioinformatics.chat

#bioinformatics

Last updated 1 year ago

naturepoker · @naturepoker
683 followers · 1342 posts · Server genomic.social

Very interesting. Sequence-function relation is expected to be simpler than often expected, according to the preprint. I'd love to see comments or reviews on this one.

The simplicity of protein sequence-function relationships | bioRxiv
biorxiv.org/content/10.1101/20

#preprint #bioinformatics #protein

Last updated 1 year ago

Lorena Pantano · @lopantano
29 followers · 18 posts · Server genomic.social

I found this repo to be very useful instead of parsing mpileup github.com/alimanfoo/pysamstat to get stats about nt matches,nt and deletions/insertions.

#bioinformatics

Last updated 1 year ago

PastelBio · @pastelbio
179 followers · 2123 posts · Server mstdn.science

RT @NCIJBSloan: One of my favorite resources is @NCI_CSSI’s catalog page. And finding tools for , together with their code repositories, documentation, and introductory videos, just got easier with this updated interface: itcr.cancer.gov/informatics-to

#nciitcr #bioinformatics #cancerresearch

Last updated 1 year ago

Physalia-courses · @PhysaliaCourses
432 followers · 262 posts · Server mas.to

🧬 Ready to dive into cutting-edge genome assembly using @PacBio data?
Join us this October for an immersive learning experience. Hurry, only 3 seats remain!

đź”— Register now: physalia-courses.org/courses-w

#genomeassembly #genomics #bioinformatics

Last updated 1 year ago

Dave Tang · @davetang
78 followers · 128 posts · Server genomic.social

I just found `alv` (github.com/arvestad/alv), a tool for viewing multiple sequence alignments on the command line, and it's perfect. I needed a tool to highlight differences and `alv -f fasta -t aa --only-variable aln.afa` does just that. Would prefer the numbering to start at 1 since sequence variants are 1-based (Data from ERR031940.)

#bioinformatics

Last updated 1 year ago

It is fascinating that we get a bunch of biological to choose from in , but no standardized terminology of their modes, or API (you can find a bewildering mix of libraries and CLI). This is gap for researchers who want to try different tools, and likely for companies in the space too. The first is the reason I am flexing my skills , leveraging the new lang features to create a standardized API for many of the recent tools. @Perl

#sequence #aligners #bioinformatics #ngs #sequencing #perl

Last updated 1 year ago

NMR Online + NMRD · @nmronline
193 followers · 208 posts · Server mstdn.science