That's it, I finally updated tidynamics to use pyproject.toml (+GitHub actions to replace travis + #PyPI + #CondaForge + #sphinx update) This means that version 1.1.2 does not support Python 2 anymore. #NumPy #Python

tidynamics is a library to compute correlations and mean-square displacements for #stochastic and #MolecularDynamics simulations.

See https://lab.pdebuyl.be/tidynamics/ https://pypi.org/project/tidynamics/

From Mervin Fansler (https://github.com/mfansler):

Still some odds and ends to deal with, but R 4.3 is ready to use in Conda Forge! We migrated over 3.2K packages these past two weeks. 🚀

Please let me know about any issues. #condaforge #conda #rstats

I have updated my blog post about how to use #QGIS from #condaforge to include #mambaforge as an alternative to miniconda. Mamba forge uses conda forge channel by default, the commands are quite similar to conda, but it's much faster!!!

https://aneto.pt/posts/tutorials/2019-05-29-using-qgis-from-conda/

New #pymrio release (v0.5.1) with support for #Parquet file storage, GLORIA #mrio downloader (parser coming soon) and some bugfixes. First release with LGPL licence. Available on pypi pypi.org/project/pymrio/ and #condaforge :
https://anaconda.org/conda-forge/pymrio

The new #parquet based file format reduces the save/read time of the full #exiobase system from around 2 min to 20 sec on a typical SSD/laptop (with half the space req).
Will present parts of this at the #iioa conference #opensource special session, Tuesday 27.6 at 1430.

trying to help a friend work around bad IT and found ourselves doing this
conda create -n basetwo
conda install -n basetwo conda
.... add forge to config...
conda activate basetwo
conda create -n realenv # now using updated conda version

what ive discovered is this actually doesnt just install conda and #condaforge in another env but it makes a nesting doll of env paths and can only work in envs the next level down

Having some Sunday fun trying to bring a conda-forge recipe back to life. Rather than spamming the CI system, today I learned that I can build the recipes locally!

python build-locally.py linux64

#python #condaforge

@kisharrington @herrsaalfeld @jni Even mamba is proving difficult on Windows and macOS. #condaforge could really use a mingw-w64 platform for Windows. For macOS, thr aarch64 situation is a struggle still. On macOS, there's some serious issues with OpenBLAS and Fortran. It's close to being resolved, but still not done.

https://github.com/scipy/scipy/issues/16949

@qgis QGIS 3.22.16 is now available for @conda on the #condaforge channel. Just do:

conda install qgis=3.22.16 -c conda-forge

One of the things that keep breaking my #python packages in #pypi or a #conda repositories like #condaforge or #bioconda is the fuzziness about dependency management.

Let's say my package depends on X, but I don't specify a particular version. All working today, but in a couple of weeks there is a X release which is not compatible.

Even if you set your dependency versions carefully, you cannot control the dependencies of your dependencies...

How do you define your dependencies? Any advice?

#HDF5 1.14.0 builds are about to land in #condaforge and #msys2. Please review if interested.

https://github.com/conda-forge/hdf5-feedstock/pull/188

https://github.com/msys2/MINGW-packages/pull/15033

We are back on track!! #QGIS 3.22.14 LTR and 3.28.2 patch releases are now available on #condaforge channel. Time to update!

https://anaconda.org/conda-forge/qgis

Check my blog if you need some bearings on how to install QGIS using conda.

https://aneto.pt/posts/tutorials/2019-05-29-using-qgis-from-conda/

#introductions

Hi, I'm a Senior Bioinformatician at SAGA Diagnostics working on #cancer diagnostics, #genomics, #ctDNA, and #liquidbiopsy. I did my PhD at Lund University working on large-scale #breastcancer #transcriptomics, and I’m still affiliated with LU working on cancer-related projects.

Before #bioinformatics I worked a lot on the #FreeBSD operating system. Nowadays I mostly contribute to #Bioconda (core team), #condaforge (R stack co-maintainer), and other bioinf / #datasci projects.

I finally pulled the plug on the Anaconda packages altogether, and only list conda-forge as an available channel in my .condarc. No problems so far :)

#CondaForge

How To Enable Conda-forge Channel For Conda Package Manager In Linux #Anaconda #Conda #Condaforge #Linux
https://ostechnix.com/enable-conda-forge-channel-for-conda-package-manager/