@dpat @effigies I'm traveling so just looking on the phone, and can't cross-check our #fMRIPrep versions yet. But a few thoughts anyway:
- are these CMRR multiband sequences? If so, have you checked the SBRef images as well as the fmaps?
- We're collecting an #fMRI dataset with 3mm iso voxels, CMRR MB4, and haven't had trouble
- are all the person's runs in a session distorted, or just some? If some, compare the fmaps, etc between good and bad runs.

Good luck!

@afni_pt @dixy0 @oesteban @DanHandwerker And many of us will be at an #OHBM course devoted to the fMRI Open QC project; please join in the discussion!

#fMRI #fMRIPrep #QC #neuroimaging

@JosetAEtzel #fMRIPrep #mriqc Cool, hadn’t seen this yet! Saren got her PhD here at the U of A. I look forward to reading this.

Thanks so much, @RemiGau, for putting this together, and in general for contributing to #DeepMReye in the past months! It is such a useful extension and will make it easier to run it on #fMRIprep outputs etc. for many people.

#DeepMReye now has a wrapper for #BIDS data! https://pypi.org/project/bidsmreye/

This is great for example to decode gaze position in #fMRI datasets processed with #fMRIprep

Thank you @RemiGau for this amazing contribution to our package! w/@CYHSM
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RT @NauMatt
#DeepMReye is out!
Use #deeplearning to perform #eyetracking in #fMRI without camera! https://www.nature.com/articles/s41593-021-00947-w

@cyhsm & I are thrilled to finally sha…
https://twitter.com/NauMatt/status/1457742155859038217

I have long been using SPM12, EEGLAB, ERPLAB and other toolboxes on #MATLAB. Though it seems like the winds are shifting and there are more and more #Python based #FOSS for neuroscience data analysis (#fMRIPrep, #BrainLife, #MNE-Python etc.). MATLAB & Zoom are the only proprietary software I use and it is tempting to let go of MATLAB. Though I have limited exp with Python and switching to it is a considerable commitment.

Have you switched to Python from Matlab and how was your experience?