🦠 I'm happy to present a new nf-core pipeline for people interested in functional analysis of #MicrobialGenomes / #Metagenomes / #Microbiomes !

If you're interested in mining metagenomes for functional groups such as #AntiMicrobialResistance genes, #AntiMicrobialPeptides or #BiosyntheticGeneClusters, @nf_core /funcscan automates the screening of such sequences from input contigs or genomes in a highly parallelised, portable, and reproducible manner

https://genomic.social/@nf_core@mstdn.science/109868600236675816 🧵 [1/2]

Some context: on one level, the main problem we're trying to solve is how to generate a quantitative, unbiased, uniquely-addressable scheme for organising #microbialgenomes - and this could address important practical issues: https://frontiersin.org/articles/10.3389/fmicb.2022.887310/full 3/8