Dr Emma Hodcroft :verified: · @firefoxx66
6504 followers · 432 posts · Server mstdn.science

🎉 CoVariants.org Update! 🎉

23A (XBB.1.5) is now available on ! It's visible as part of Per Country & Per Variant plots, on the shared mutation page - and of course, has a page of its own.

This is in line with the recent addition of 23A (XBB.1.5) as a @nextstrain clade - read more on that in this tweet thread: twitter.com/nextstrain/status/

1/N

#CoVariants #xbb15 #23a #nextstrain

Last updated 3 years ago

Hufool · @hufool
2 followers · 4 posts · Server social.tchncs.de
also jess 🏴‍☠️ · @jessdkant
736 followers · 301 posts · Server kolektiva.social

Phylogenetic data via shows that the surge was in part due to overtaking . Relatively speaking, is still comparatively new and it may take a minute to see how fast it spreads.

It's really 🤬 frustrating that we don't have decent case count data because of almost exclusive use of tests and no routinized roll-out of Ag test reporting. We're 3 years in, we should be hurling resources at this thing like nothing else.

#nextstrain #Omicron #Delta #XBB #antigen

Last updated 3 years ago

Josh Powell Ph.D. 🦠🔬☣ · @jpowell
257 followers · 32 posts · Server mstdn.science

Keeping track of clade designations can be challenging. The explanation on (link below) does a great job explaining the 2022 mutations within omicron resulting in 3 distinct clades.
nextstrain.org/blog/2022-04-29

#SarsCoV2 #nextstrain #virology

Last updated 3 years ago

Josh Powell Ph.D. 🦠🔬☣ · @jpowell
141 followers · 5 posts · Server mstdn.science

What the team has done for the community over the last few years is nothing short of remarkable. This collaborative online free platform is intuitive as anyone can see the evolution of , and suite of other important pathogens. I'll be using it as part of a high school guest lecture about and virus surveillance with students next week. Give it a try, its easy to use! nextstrain.org/

#nextstrain #virology #influenza #SarsCoV2

Last updated 3 years ago

Dr Emma Hodcroft :verified: · @firefoxx66
2841 followers · 123 posts · Server mstdn.science

There's also a link to the /
@nextstrain
focal build: nextstrain.org/groups/neherlab

Here, we can zoom in on the clade & get a closer look at how 22F sequences are distributed around the world, & their diversity.

5/9

#22F #xbb #nextstrain

Last updated 3 years ago

Dr Emma Hodcroft :verified: · @firefoxx66
2841 followers · 123 posts · Server mstdn.science

As I tweeted earlier, () is a variant - the first officially elevated using the clade designations. You can read more about what that means in my twitter thread below!

twitter.com/firefoxx66/status/

3/9

#22F #xbb #recombinant #nextstrain

Last updated 3 years ago

Dr Emma Hodcroft :verified: · @firefoxx66
2841 followers · 123 posts · Server mstdn.science

This is in line with the recent addition of () as a @nextstrain clade - read more on that in the twitter link! 👇🏻

twitter.com/nextstrain/status/

2/9

#22F #xbb #nextstrain

Last updated 3 years ago