It's back to school so how about learning how to write #reproducible #datascience pipelines with #RStats ?

My book "Building reproducible analytical pipelines with #rstats" can help you with that!

Buy a drm-free epub or pdf @leanpub

https://leanpub.com/raps-with-r/

Physical copies are available https://amazon.com/dp/B0C87H6MGF (check your local market place)

Read for free forever: https://raps-with-r.dev

Some time ago somebody compiled a list of papers with models (from ecology) that can be reproduced for a post-graduate course? #reproducible #models #ecology #openScience

New #preprint about our experiences offering 'reproducibility as a service' for a six month period: https://psyarxiv.com/k8d4u/

We made 10 papers #reproducible from @YorkPsychology covering a wide range of study designs, supported by funding from Research England 1/6

@brodriguesco I just cast a quick (and very inexpert) eye over your https://github.com/b-rodrigues/rix repo. I see the claim that "With Nix, it is essentially possible to replace {renv} and Docker combined."

What level of dependency *can't* be addressed by Nix? Obviously not hardware. What about OS version?

#rstats #Nix #reproducible

if you want to know more about me and my latest book on #reproducible pipelines with #RStats here's my interview with Len Epp from @leanpub 👇

https://youtu.be/aXfjhf2cDo0

@mpjgregoire Making #Jupyter notebooks online interactive #reproducible is quite easy. All that is needed is to add a description of the libraries you want to use. I used environment.yml

Structural-Engineering online 🎉
👇
https://mybinder.org/v2/gh/arnim/Jupyter-Structural-Engineering/HEAD

Let me know if it works!

If you want to pull
https://github.com/arnim/Jupyter-Structural-Engineering/tree/main

#OpenScience #BinderReady

#MATLAB has a new, small but awesome feature - open any public github repo in the cloud - get this - even if you don't have a MATLAB license.

New post on the #reproducible MATLAB blog here: https://reproduciblematlab.github.io/blog/posts/2023-07-24-one-small-step/

Also available on my new and shiny project: Reproducible Temperature Visualisations with MATLAB https://github.com/reproducibleMATLAB/temperature-visualisations

Open this project in MATLAB online to create stunning visualisations of surface temperature data and visualise #climate change: https://matlab.mathworks.com/open/github/v1?repo=reproducibleMATLAB/temperature-visualisations&project=temperature_visualisations.prj&file=temperature_visualisations.mlx

@androcat @arstechnica Scientists are currently very concerned about the growing trend of experimental results that are not #reproducible. That’s something that social ‘scientists’ fortunately don’t have to be concerned about. 🤷🏻‍♂️

On empathy… https://www.cam.ac.uk/research/news/study-finds-that-genes-play-a-role-in-empathy

Ach herrje... Mir ist gerade aufgefallen das ich zwar das Konzept der "reproduzierbare builds" kapiere und auch das Problem verstehe, aber keine Ahnung habe worauf man achten muss oder was da wichtig für ist... Oh Mist...
Kann mir da einer eine gute Quelle empfehlen?

#software #development #reproducible #build #concept

I have compiled a small list of #rstats
packages for #dendrochronology and #tree-#ring analysis.
This might help people to find the right software for #openscience and #reproducible #research

Please, let me know if I missed something!

https://github.com/RonaldVisser/Dendro_R

This event is finally happening next week! 👇

With colleges from a range of disciplines, we will discuss how to embed #openscience principles in teaching #reproducible research

More details and how to grab a few final places are here:
https://www.sheffield.ac.uk/smi/events/teaching-reproducible-research-and-open-science-conference

💥 Happening TODAY!

👩‍🏫 Register to learn the latest emerging initiatives led by @turingway, a community-led project that has impacted the #reproducible #collaborative #ethical research culture across many organisations and individuals

Further info ⬇️:
https://www.eventbrite.co.uk/e/talk-with-the-expert-reproducible-inclusive-collaborative-data-science-tickets-634543134597

@jr @itzzenxx which I think is bad since @fdroidorg actually aims to do #FLOSS in a #reproducible and verifyable manner...

Also one doesn't upload an #APK to #Fdroid - they just pull the repo and build it from source.

Which is why they only accept FLOSS...

Not shoure how @accrescent does it or whether they accept CCSS and / or Freeware that isn't FLOSS and provided as source, tho they seem to hint at that...

https://mstdn.social/@kkarhan/110335501595286382

@cwebber @mcc

Well, at best I have seen #guix at about 86% #reproducible ...

https://data.guix.gnu.org/repository/1/branch/master/latest-processed-revision/package-reproducibility

Today, it is about 92% unknown... the two build farms have a fair amount of catching up to do after the core-updates merge.

"guix" itself is not particularly reproducible, due to non-determinism with parallelism in guile. Parallelism in the Debian package of guix is disabled so is reproducible there, at least!

Would be good to see how much of the #bootstrap is bit-for-bit reproducible!

Dang! Forgot to make the big announcement for this: Tomorrow (April 25 2023, 4:15PM Eastern) 8th session of #CRRESS, "Should funders require #reproducible archives?" with Martin Halbert (NSF), Sebastian Martinez (3ie) and @StuartBuck1 (Good Science Project) https://cornell.zoom.us/webinar/register/WN_4Km3W2dNQNK1mJ9U8Ah-GA

📚Learn how to create #reproducible computational environments with rang #rpackage and #Apptainer / #Singularity in the readme: https://github.com/chainsawriot/rang/blob/v0.3/README.md#using-apptainersingularity-containers 👇🧵

🧵📢 Excited to share that I've added #Apptainer / #Singularity support to rang #rpackage for #reproducible #OpenScience! 🎉🔬 Check it out: https://github.com/chainsawriot/rang/ Huge thanks to
@chainsawriot for support & code review! 👇🧵

Reproducable builds of Trisquel GNU/Linux in progress! #trisquel #aramo #gnu #reproducible https://gitlab.com/debdistutils/reproduce-trisquel

Tomorrow @unioslo will be hosting an evening #DHNB2023 keynote by @malvikasharan from @turingway who will talk about #OpenScience for Enabling #Reproducible, #Ethical and #Collaborative Research - if you’re around in Oslo make sure you register and join the reception before the talk 🥂

Not in Oslo? You can follow the live stream of the talk! 💻

Check out the event page for more information: https://www.ub.uio.no/english/libraries/dsc/open-repro-research/DHNB2023/malvika-sharan.html

Anyone can read the chapter, follow the #reproducible examples + try the exercises here: https://r.geocompx.org/algorithms.html in our shiny new #geocompx website. It is live 🚀 #openscience