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Robert Castelo · @robertclab
98 followers · 371 posts · Server genomic.social

RT @hagentilgner
Andrey & Alla put out the newest version of Isoquant
(nature.com/articles/s41587-022); Results unchanged but memory usage down ~10-15 fold and disk usage down ~5-fold;
github.com/ablab/IsoQuant/rele
@iRnaCosi

#longread #RNA #nanopore #PacBio #genomics #transcripomics #rnaseq #splicing

Last updated 2 years ago
Original post

Anupama Jha, PhD · @AnupamaJha48
67 followers · 26 posts · Server genomic.social

RT @hagentilgner
Out in @NatureBiotech: What isoforms are really in your @PacBio or @nanopore run? Andrey&Alla (with help by @noush_joglekar, AS, @jjarroux &AL) have precise answers:
nature.com/articles/s41587-022
@iRnaCosi

#longread #RNA #nanopore #PacBio #genomics #transcripomics #rnaseq #splicing

Last updated 2 years ago
Original post

Martin Smith · @Martinalexsmith
387 followers · 271 posts · Server genomic.social
Nature - Accurate isoform discovery with IsoQuant using long reads - Nature Biotechnology

RT @hagentilgner@twitter.com

Out in @NatureBiotech@twitter.com: What isoforms are really in your @PacBio@twitter.com or @nanopore@twitter.com run? Andrey&Alla (with help by @noush_joglekar@twitter.com, AS, @jjarroux@twitter.com &AL) have precise answers:
nature.com/articles/s41587-022
@iRnaCosi@twitter.com

🐦🔗: twitter.com/hagentilgner/statu

#longread #RNA #nanopore #PacBio #genomics #transcripomics #rnaseq #splicing

Last updated 2 years ago
Original post

Robert Castelo · @robertclab
75 followers · 111 posts · Server genomic.social
Nature - Accurate isoform discovery with IsoQuant using long reads - Nature Biotechnology

RT @hagentilgner
Out in @NatureBiotech: What isoforms are really in your @PacBio or @nanopore run? Andrey&Alla (with help by @noush_joglekar, AS, @jjarroux &AL) have precise answers:
nature.com/articles/s41587-022
@iRnaCosi

#longread #RNA #nanopore #PacBio #genomics #transcripomics #rnaseq #splicing

Last updated 2 years ago
Original post

Hagen Tilgner · @hagentilgner
63 followers · 43 posts · Server genomic.social

Out in @NatureBiotech: What isoforms are really in your @PacBio or @nanopore run? Andrey&Alla (with help by @noush_joglekar, AS, @jjarroux &AL) have precise answers:
nature.com/articles/s41587-022
@iRnaCosi

#longread #RNA #nanopore #PacBio #genomics #transcripomics #rnaseq #splicing

Last updated 2 years ago
Original post