🕉 📝 ☣️ CHECK OUT US 🇺🇸 #COVID19 #VariantDashboard - #USA 🇺🇸
TOP #SARSCoV2 Lineages 07/21/23 #21DAYTRENDS
11.9% XBB.1.16
9.7% EG.5.1👀⬆️
9.0% XBB.1.5
3.6% XBB.1.16.6
3.3% XBB.1.16.1
2.9% FL.1.5.1
Includes ~37% Airport surveillance sequences| Tracker
https://public.tableau.com/app/profile/raj.rajnarayanan/viz/USAVariantDB/VariantDashboard
📷 🎢 | 07/21/23 (Raj Rajnarayanan, RajlabN @mstdn.science)
#covid19virus #transmission 🦠 #covid19variants 💨

#IDMastodon #Publichhealth #CovidIsNotOver must keep that 😷 on
#COVID19 #variantdashboard🇺🇸🧵@rajlabn
TOP lineages #21DayTrends
14.5% XBB.1.5
9.7% XBB.1.16
4.5% XBB.1.9.1
4.4% EG.5.1
3.9% XBB.1.16.1
2.9% EG.1
2.8% FU.1
~36% Airport surveillance seqs| #SARSCoV2 Tracker: tinyurl.com/mryj4uu7| 06/28/23 1/n
https://public.tableau.com/app/profile/raj.rajnarayanan/viz/USAVariantDB/VariantDashboard
https://public.tableau.com/app/profile/raj.rajnarayanan/viz/USAVariantDB/VariantDashboard

~40% of XBB.1.16 & 29% of XBB.2.3* sequences submitted from USA were identified by Airport Surveillance [@ 7 international airports (#California, #NewYork, #Washington, #NewJersey, #Georgia and #Virginia)]

Dashboard without airport sequences

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RT @RajlabN
#COVID19 #VariantDashboard - #USA
[without "Airport Surveillance" sequences]

Top lineages (#15DayTrends):

XBB.1.5 (62.5%)
XBB.1.16 (3.4%)
XBB.1.9.1 (3.4%)
XBB.1.5.1 (2.6%)
…
https://twitter.com/RajlabN/status/1654324802763587584

Overall trends consistent with #VariantDashboard #15DayTrends - #USA

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RT @RajlabN
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (#15DAYTRENDS):

54.5% XBB.1.5
5.8% XBB.1.16
5.2% XBB.1.9.1
2.6% XBB.1.16.1
2.5% XBB.1.5.1
2.2% XBB.2.3
2.1% XBB.1.9.2
1.7% EG.1

#SARSCoV2 Tracker: http://tinyurl.com/mryj4uu7 Updated: 05/04/23

1/n
https://twitter.com/RajlabN/status/1654323743223607297

#COVID19 #VariantDashboard - #USA
[without "Airport Surveillance" sequences]

Top lineages (#15DayTrends):

XBB.1.5 (62.5%)
XBB.1.16 (3.4%)
XBB.1.9.1 (3.4%)
XBB.1.5.1 (2.6%)
XBB.1.5.13 (1.6%)
XBB.2.3 (1.5%)
FL.2 (1.3%)
EG.1 (1.1%)
FU.1 (1.1%)
XBB.1.16.1 (1.1%)

2/n

#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (#15DAYTRENDS):

54.5% XBB.1.5
5.8% XBB.1.16
5.2% XBB.1.9.1
2.6% XBB.1.16.1
2.5% XBB.1.5.1
2.2% XBB.2.3
2.1% XBB.1.9.2
1.7% EG.1

#SARSCoV2 Tracker: http://tinyurl.com/mryj4uu7 Updated: 05/04/23

1/n

#COVID19 #VariantDashboard - #USA
[without "Airport Surveillance" sequences]

Top lineages (#15DayTrends):
XBB.1.5 (65.3%)
XBB.1.9.1 (3.2%)
XBB.1.16 (2.4%)
XBB.1.5.1 (2.2%)
XBB.1.5.13 (1.5%)
XBB.1.5.17 (1.5%)
XBB.1.5.15 (1.2%)
XBB.1.9.2 (1.2%)
FL.2 (1.1%)
XBB.2.3 (1%)

2/n

#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (#15DAYTRENDS):

56.6% XBB.1.5
5.1% XBB.1.16
5.0% XBB.1.9.1
2.4% XBB.1.16.1
2.1% XBB.1.5.1
1.9% XBB.1.9.2
1.6% XBB.2.3
1.4% EG.1

#SARSCoV2 Tracker: http://tinyurl.com/mryj4uu7 Updated: 05/03/23

1/n

Granular details - #VariantDashboard #India - #30DayTrends

XBB.1.16* (79.7%) is still the dominant variant group in #India, followed by XBB.2.3* (13%)

Note: Data limited to few States that are sequencing and rapidly submitting data

#VariantDashboard #India - #30DayTrends

Top Circulating Lineages:

XBB.1.16 (64.5%)
XBB.1.16.1 (9.7%)
XBB.2.3 (7.7%)
XBB.1.16.2 (3.7%)
XBB.2.3.2 (3.2%)
XBB.1.5 (2%)
XBB.2.3.4 (1.3%)
XBB.1 (1.2%)
XBB.1.9.1 (0.9%)

Tracker:https://public.tableau.com/app/profile/raj.rajnarayanan/viz/VariantDashboard_INDIA/VariantDashboard

Updated: 05/02/23

#COVID19 #VariantDashboard - #USA
[without sequences from "Airport Surveillance"]

Top lineages (#15DayTrends):

XBB.1.5 (64.3%)
XBB.1.9.1 (3.9%)
XBB.1.5.1 (2.5%)
XBB.1.16 (2.2%)
XBB.1.9.2 (1.5%)
XBB.1.5.13 (1.4%)
XBB.1.5.17 (1.3%)
XBB.1.5.15 (1.3%)
FL.2 (1.2%)

2/n

#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (#15DAYTRENDS):

56.4% XBB.1.5
5.4% XBB.1.9.1
4.8% XBB.1.16
2.3% XBB.1.5.1
2.3% XBB.1.9.2
1.9% XBB.1.16.1
1.6% XBB.2.3
1.3% EG.1

#SARSCoV2 Tracker: http://tinyurl.com/mryj4uu7 Updated: 05/02/23

1/n

#COVID19 #VariantDashboard - #USA
[without sequences from "Airport Surveillance"]

Top lineages (#15DayTrends):

XBB.1.5 (61.7%)
XBB.1.9.1 (5.5%)
XBB.1.16 (2.4%)
XBB.1.5.1 (2.3%)
XBB.1.5.13 (1.6%)
XBB.1.5.17 (1.6%)
XBB.1.9.2 (1.6%)
XBB.1.5.15 (1.3%)
FD.2 (1%)

2/n

#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (#15DAYTRENDS):

56.2% XBB.1.5
6.1% XBB.1.9.1
4.5% XBB.1.16
2.2% XBB.1.5.1
2.1% XBB.1.9.2
1.4% XBB.1.5.13
1.4% XBB.1.5.15
1.4% XBB.1.5.17

#SARSCoV2 Tracker: http://tinyurl.com/mryj4uu7 Updated: 05/01/23

1/n

#COVID19 #VariantDashboard - #USA
[without sequences from "Airport Surveillance"]

Top lineages (#15DayTrends):

XBB.1.5 (61.1%)
XBB.1.9.1 (8.0%)
XBB.1.16 (3.5%)
FL.2 (1.7%)
XBB.1.5.1 (1.7%)
XBB.1.5.17 (1.7%)
XBB.1.9.2 (1.4%)
XBB.1.5.15 (1.2%)

2/n

#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (#15DAYTRENDS):

49.7% XBB.1.5
8.3% XBB.1.16
8.3% XBB.1.9.1
2.3% XBB.1.9.2
2.1% XBB.1.16.1
1.6% XBB.1.5.1
1.4% XBB.2.3

>> Low Sequence Count <<
#SARSCoV2 Tracker: http://tinyurl.com/mryj4uu7 Updated: 04/30/23

1/n

Granular details -#VariantDashboard #USA #15DayTrends

XBB.1.5* (VOI -@WHO) is still ahead of the other lineages!

5/n

#COVID19 #VariantDashboard - #USA

[without sequences from "Airport Surveillance"]

Top lineages (#15DayTrends):

XBB.1.5 (63.5%)
XBB.1.9.1 (6.5%)
XBB.1.16 (3.5%)
XBB.1.5.1 (1.7%)
XBB.1.5.17 (1.4%)
FD.2 (1.2%)
XBB.1.9.2 (1.2%)
XBB.1.5.13 (1%)

2/n

#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (#15DAYTRENDS):

51.4% XBB.1.5
8.4% XBB.1.16
6.7% XBB.1.9.1
2.5% XBB.1.16.1
2.1% XBB.2.3
2.0% XBB.1.5.1
2.0% XBB.1.9.2
1.1% XBB.1.5.15

#SARSCoV2 Tracker: http://tinyurl.com/mryj4uu7 Updated: 04/28/23

1/n

~39% of XBB.1.16 sequences deposited in GISAID from USA were identified by Airport Surveillance [@ 7 international airports from 6 US States (#California, #NewYork, #Washington, #NewJersey, #Georgia and #Virginia)]

Dashboard without airport seqs

https://twitter.com/RajlabN/status/1651796764268085248

5/n
---
RT @RajlabN
#COVID19 #VariantDashboard - #USA
[without sequences from "Airport Surveillance"]

Top lineages (#15DayTrends):

XBB…
https://twitter.com/RajlabN/status/1651796764268085248