The analysis was performed using our SIB Software Resource #Vpipe - the #NGS #bioinformatics pipeline tool for virus #sequencing.
Detection handled by the component COJAC.

More details on our project and procedure available at https://cov-spectrum.org/stories/wastewater-in-switzerland and at https://github.com/cbg-ethz/cowwid
…

#opensource
#snakemake

If you have questions about the methods and the data, you can drop by at the official chat of the #Vpipe SIB Software Resource (accessible via Gitter and Matrix) and meet the developers:
https://cbg-ethz.github.io/V-pipe/contact/

(Please do not try to DM me on Xitter, I vicerally hate that network)

Thank you for your attention!

If you have questions about the methods and the data, you can drop by at the official chat of the #Vpipe SIB Software Resource (accessible via Gitter and Matrix) and meet the developers:
https://cbg-ethz.github.io/V-pipe/contact/

(Please do not try to DM me on Xitter, I vicerally hate that network)

Thank you for your attention!